Webb25 dec. 2024 · Contribute to SJSU-PHMM/malware-training-detection development by creating an account on GitHub. Skip to content Toggle navigation. Sign up Product ... The cvAUC R package provides a computationally efficient means of estimating confidence intervals (or variance) of cross-validated Area Under the ROC Curve (AUC) estimates. Webb29 nov. 2024 · GenomicFeatures, Rsamtools and GenomicRanges (packages from Bioconductor) depmixS4 (package from CRAN) Sorted bam file (and accompanying index file) with alignment of reads to a reference genome; Download the R Scripts. phmm.zip (7KB) A Readme file is included to instruct on the execution of the scripts.
Specifying variance structure in mixed effects Cox model in R
Webbphmm (version 0.7-14) linear.predictors: PHMM Design Description Internal function for extracting the linear predictors of the PHMM model from an object of class phmm returned by phmm. Usage linear.predictors (x) Arguments x an object of class phmm. Value A vector of estimates from call to phmm of β ′ x i j + w i j ′ b i. WebbPackage ‘phmm’ February 15, 2013 Version 0.7-4 Date 2012-04-02 Title Proportional Hazards Mixed-effects Model (PHMM) Author Michael Donohue and Ronghui Xu Maintainer Michael Donohue Depends survival, lattice, Matrix Suggests lme4 Description Fits proportional hazards model incorporating random malian desert city crossword clue
linear.predictors function - RDocumentation
Webb2 phmm-package phmm-package Proportional Hazards with Mixed Model (PHMM) Description Fits proportional hazards model incorporating random effects. The function … Webb21 jan. 2004 · There are two major pHMM software packages, HMMER and SAM , with small differences between their model topologies. So far we have described the HMMER model. The SAM model allows more state transitions: In addition to the transitions marked by the solid arrows in Figure 1 , the transitions marked by dashed arrows, D i → I i and I i … Webb26 mars 2024 · The phmm package contains the following man pages: AIC.phmm cAIC.phmm linear.predictors loglik.cond phmm phmm.cond.loglik phmm-package … malian desert city crossword