Interpro hits
WebObjective: To describe the process of a transcriptome characterization using Blast2GO.; Input data: A mouse RNA-seq dataset composed of 140803 contigs.; Pipeline: Blastx and InterproScan were performed with the complete dataset to identify proteins. Sequences with no Blastx hits nor IPS results were selected and further analyzed. RFAM and Local … WebInterPro is a database of protein families, protein domains and functional sites in which identifiable features found in known proteins can be applied to new protein sequences in …
Interpro hits
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WebApr 4, 2024 · homologue of trithorax (ATX1); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc … WebDownload scientific diagram Graphical representation of the InterPro hits to the acetylcholinesterase catalytic subunit of E. electricus (electric eel) (O42275). from …
WebNov 13, 2024 · Analysis workflow. Objective: To describe the process of a transcriptome characterization using Blast2GO. Input data: A mouse RNA-seq dataset composed of … WebInterPro is an integrative database which was established 10 years prior when the PROSITE, PRINTS, Pfam and ProDom databases framed a consortium to amalgamate …
WebJan 1, 2001 · Signature databases are vital tools for identifying distant relationships in novel sequences and hence for inferring protein function. InterPro is an integrated … WebThis InterPro resource is then applied across the UniProt KnowledgeBase, and all UniProtKB protein sequences that have matches to a particular InterPro entry are cross …
WebDownload page¶. This is available under the Download section in the navigation menu.This page is divided into multiple tabs. The InterPro tab provides various files containing pre-calculated InterPro data for the current release that can be downloaded. Data from previous releases are available in the InterPro ftp.. The InterProScan tab provides a …
WebInterpro Translation Solutions, Inc. 7,066 followers 1d Report this post Report Report. Back ... gilson winsted ctWebInterPro combines signatures from multiple, diverse databases into a single searchable resource, reducing redundancy and helping users interpret their sequence analysis … fujitsu usb type-c port replicator 2 driverWebJan 13, 2024 · Interpro 通过整合多个蛋白相关的数据库,提供了一个方便的对蛋白序列进行功能注释的平台,功能注释的内容包括蛋白质家族预测,domain 和 结合位点预测. … gilson wt-6WebJan 1, 2005 · InterPro entries are annotated with a name, an abstract, mapping to Gene Ontology (GO) terms and links to specialized databases. InterPro groups all protein … gil soundtrack award 2022http://maize.uga.edu/MSU_func_download.shtml gilson yellow tipsWebMay 3, 2014 · Overview of data analysis in the European Bioinformatics Institute's InterPro database ... (single linkage, aka nearest neighbour) • Orthologues (best reciprocal hit) – … fujitsu usb type-c port replicator driverWebDec 1, 2000 · Each InterPro entry lists all the matches against SWISS-PROT and TrEMBL (more than 1000000 hits from 264333 different proteins out of 384572 in SWISS-PROT and TrEMBL). fujitsu usb type-c port replicator - pro 9